Class AnalyzeToDicom


  • public class AnalyzeToDicom
    extends java.lang.Object

    A class for converting Analyze image input format files into images of a specified or appropriate SOP Class.

    • Constructor Summary

      Constructors 
      Constructor Description
      AnalyzeToDicom​(java.lang.String inputFileName, java.lang.String outputFileName, java.lang.String patientName, java.lang.String patientID, java.lang.String studyID, java.lang.String seriesNumber, java.lang.String instanceNumber)
      Read an Analyze image input format files and create an image of a specified or appropriate SOP Class.
      AnalyzeToDicom​(java.lang.String inputFileName, java.lang.String outputFileName, java.lang.String patientName, java.lang.String patientID, java.lang.String studyID, java.lang.String seriesNumber, java.lang.String instanceNumber, java.lang.String modality, java.lang.String sopClass)
      Read an Analyze image input format files and create an image of a specified or appropriate SOP Class.
    • Constructor Detail

      • AnalyzeToDicom

        public AnalyzeToDicom​(java.lang.String inputFileName,
                              java.lang.String outputFileName,
                              java.lang.String patientName,
                              java.lang.String patientID,
                              java.lang.String studyID,
                              java.lang.String seriesNumber,
                              java.lang.String instanceNumber)
                       throws java.io.IOException,
                              DicomException,
                              AnalyzeException

        Read an Analyze image input format files and create an image of a specified or appropriate SOP Class.

        Parameters:
        inputFileName -
        outputFileName -
        patientName -
        patientID -
        studyID -
        seriesNumber -
        instanceNumber -
        Throws:
        java.io.IOException
        DicomException
        AnalyzeException
      • AnalyzeToDicom

        public AnalyzeToDicom​(java.lang.String inputFileName,
                              java.lang.String outputFileName,
                              java.lang.String patientName,
                              java.lang.String patientID,
                              java.lang.String studyID,
                              java.lang.String seriesNumber,
                              java.lang.String instanceNumber,
                              java.lang.String modality,
                              java.lang.String sopClass)
                       throws java.io.IOException,
                              DicomException,
                              AnalyzeException

        Read an Analyze image input format files and create an image of a specified or appropriate SOP Class.

        Parameters:
        inputFileName -
        outputFileName -
        patientName -
        patientID -
        studyID -
        seriesNumber -
        instanceNumber -
        modality - may be null
        sopClass - may be null
        Throws:
        java.io.IOException
        DicomException
        AnalyzeException
    • Method Detail

      • generateGeometryFunctionalGroupsFromAnalyzeHeader

        public static AttributeList generateGeometryFunctionalGroupsFromAnalyzeHeader​(AnalyzeHeader analyze,
                                                                                      AttributeList list,
                                                                                      int numberOfFrames)
                                                                               throws DicomException

        Read a per-frame and shared functional group sequences for the geometry defined in a Analyze file header.

        Parameters:
        analyze - an Analyze header
        list - an existing (possibly empty) attribute list, if null, a new one will be created; may already shared and per-frame functional group sequences or they will be added
        numberOfFrames - return attribute list with per-frame and shared functional group sequences for geometry added
        Throws:
        DicomException
      • generateDICOMPixelDataModuleAttributesFromAnalyzeFile

        public static AttributeList generateDICOMPixelDataModuleAttributesFromAnalyzeFile​(java.io.File inputFile,
                                                                                          AnalyzeHeader analyze,
                                                                                          AttributeList list)
                                                                                   throws java.io.IOException,
                                                                                          DicomException,
                                                                                          AnalyzeException

        Using an Analyze image input file and header, create DICOM Pixel Data Module attributes.

        Parameters:
        inputFile - an Analyze format image file
        analyze - an Analyze header already read from the inputFile
        list - an existing (possibly empty) attribute list, if null, a new one will be created; may already include "better" image pixel module attributes to use return attribute list with Image Pixel Module (including Pixel Data) and other attributes added
        Throws:
        java.io.IOException
        DicomException
        AnalyzeException
      • main

        public static void main​(java.lang.String[] arg)

        Read an Analyze image input format files and create an image of a specified or appropriate SOP Class.

        Parameters:
        arg - seven, eight or nine parameters, the inputFile, outputFile, patientName, patientID, studyID, seriesNumber, instanceNumber, and optionally the modality, and SOP Class