Class MergeCompositeContextForOneEntitySelectively
- java.lang.Object
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- com.pixelmed.apps.MergeCompositeContextForOneEntitySelectively
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public class MergeCompositeContextForOneEntitySelectively extends java.lang.Object
A class containing an application for merging the composite context of multiple instances for consistency.
The merge can be performed at a specified entity/module level or the default patient level.
All source files are presumed to be of the same entity at the specified or default level (e.g., the same patient) and no cross-references between instances are required.
Various known dummy values are treated as if they were zero length or absent if conflicting with non-dummy values.
- See Also:
MergeCompositeContext
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Nested Class Summary
Nested Classes Modifier and Type Class Description protected class
MergeCompositeContextForOneEntitySelectively.OurFirstPassMediaImporter
protected class
MergeCompositeContextForOneEntitySelectively.OurSecondPassMediaImporter
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Field Summary
Fields Modifier and Type Field Description protected java.lang.String
dstFolderName
protected java.lang.String
ourAETitle
protected CompositeInstanceContext.Selector
selector
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Constructor Summary
Constructors Constructor Description MergeCompositeContextForOneEntitySelectively(CompositeInstanceContext.Selector selector, java.lang.String[] srcs, java.lang.String dstFolderName, MessageLogger logger)
Merge the composite context of multiple instances for consistency.MergeCompositeContextForOneEntitySelectively(CompositeInstanceContext.Selector selector, java.lang.String src, java.lang.String dstFolderName, MessageLogger logger)
Merge the composite context of multiple instances for consistency.
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description protected boolean
isNonZeroLengthDummyValue(java.lang.String value)
static void
main(java.lang.String[] arg)
Merge the composite context of multiple instances for consistency.protected CompositeInstanceContext
mergeSelectedContext(CompositeInstanceContext newContext)
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Field Detail
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ourAETitle
protected java.lang.String ourAETitle
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dstFolderName
protected java.lang.String dstFolderName
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selector
protected CompositeInstanceContext.Selector selector
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Constructor Detail
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MergeCompositeContextForOneEntitySelectively
public MergeCompositeContextForOneEntitySelectively(CompositeInstanceContext.Selector selector, java.lang.String src, java.lang.String dstFolderName, MessageLogger logger) throws java.io.IOException, DicomException
Merge the composite context of multiple instances for consistency.
- Parameters:
selector
- selected entities/modules to mergesrc
- source folder or DICOMDIRdstFolderName
- destination folderlogger
- logger to send progress, warnings and errors- Throws:
java.io.IOException
- if there is a problem reading or writingDicomException
- if there is a problem parsing or extracting required content
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MergeCompositeContextForOneEntitySelectively
public MergeCompositeContextForOneEntitySelectively(CompositeInstanceContext.Selector selector, java.lang.String[] srcs, java.lang.String dstFolderName, MessageLogger logger) throws java.io.IOException, DicomException
Merge the composite context of multiple instances for consistency.
- Parameters:
selector
- selected entities/modules to mergesrcs
- source folders or DICOMDIRsdstFolderName
- destination folderlogger
- logger to send progress, warnings and errors- Throws:
java.io.IOException
- if there is a problem reading or writingDicomException
- if there is a problem parsing or extracting required content
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Method Detail
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isNonZeroLengthDummyValue
protected boolean isNonZeroLengthDummyValue(java.lang.String value)
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mergeSelectedContext
protected CompositeInstanceContext mergeSelectedContext(CompositeInstanceContext newContext)
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main
public static void main(java.lang.String[] arg)
Merge the composite context of multiple instances for consistency.
The files are processed in the order in which they are specified on the command line, and when there is a conflict, the first values are used. This can be used to make sure that all PatientIDs, for example are coerced to the first one specified.
For example, if a folder of images for a patient is specified first, and then a folder of structured reports or presentation states corresponding to those images but with different patient level identifiers is specified second, then the latter (the reports or presentation states) will be cooerced to have the same patient context as the former (the images).
Entity/module arguments recognized are -patient|-study|-equipment|-frameofreference|-series|-instance|srdocumentgeneral.
If no entity/module argument is specified, only the patient context will be merged.
- Parameters:
arg
- array of 2 or more strings - an optional list of entities/modules to merge, followed by one or more source folders or DICOMDIR (to merge and use as a source of context), and a destination folder
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